hi

i just started crunching 4 days ago and i'm enyoing to graphic coming with the programm.

i am working at the university of vienna/austria at the department of analytical chemistry (yes we are doing some proteomics here too *g*)

today i compared NMR structures to the native ones given by you. eg 1DCJ aka YhhP. in the literature 1DCJ has 81 amino acids but in the cruncher it comes with only 73 (missing 8 units). is this intended or is there any other cause for that?

best regards

peter fruehauf

today i compared NMR structures to the native ones given by you. eg 1DCJ aka YhhP. in the literature 1DCJ has 81 amino acids but in the cruncher it comes with only 73 (missing 8 units). is this intended or is there any other cause for that?

Peter,
If you look at the NMR structure, the first several residues are unstructured. We don't usually try to predict the positionsof residues that don't have a well defined configuration:

thx @ jack

---