Message boards : Number crunching : simIF2...ProteinInterfaceDesign...-tasks
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Jochen Send message Joined: 6 Jun 06 Posts: 133 Credit: 3,847,433 RAC: 0 |
Hi Joe, These two tasks ran for about 4 hours, according to the taks details. But they both had been running for more than 7 hours, when I turned off the computer. So they fell back to the last save point, which was near to 4 hours on both tasks, when I turned it back on. Looking at the computation time, they are giving me trouble, since I have lost 3 hours of work per tasks. I was suprised about the amount of credits granted on this two tasks, but you can't predict, how much credit is granted for the fc_A_noSmallMvs-tasks: Low credit: https://boinc.bakerlab.org/rosetta/result.php?resultid=353446268 https://boinc.bakerlab.org/rosetta/result.php?resultid=353455781 High credit: https://boinc.bakerlab.org/rosetta/result.php?resultid=353279271 cu Joe |
![]() Send message Joined: 11 May 06 Posts: 51 Credit: 81,712 RAC: 0 |
Hi Joe, Thanks, Joe! We'll next figure out different ways to reduce considerably the number of long-running trajectories. In the meantime, to make sure that you don't lose computing time as you suspend jobs, Mod.Sense's suggestion makes a lot of sense. In the boinc manager, go to Advanced/Preferences, select the "disk and memory usage" tab and check the "leave applications in memory while suspended option". |
![]() Send message Joined: 12 Feb 10 Posts: 20 Credit: 10,552,445 RAC: 0 |
I have noticed that when these protein interface tasks stop check pointing,that when you show graphics the model in progress will have a very high number for the step that it is on. I have seen tasks that have not check pointed for several hours with a model at over 100k steps. It seems like when I look at the graphics of a protein interface task that is updating its' checkpoint it is making a model every 500 steps. |
Message boards :
Number crunching :
simIF2...ProteinInterfaceDesign...-tasks
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