how to use rosetta@home to predict my own RNA structure

Questions and Answers : Getting started : how to use rosetta@home to predict my own RNA structure

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Shuxing Zhang

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Message 52522 - Posted: 16 Apr 2008, 16:02:18 UTC

I would like to predict the structure of my RNA using Rosetta@home. I have downloaded the software, installed and created my account. But how to upload my input files (such as RNA sequence) and start running the prediction job?

My email is shuzhang@mdanderson.org.

Thanks

Shuxing
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Message 52523 - Posted: 16 Apr 2008, 16:15:45 UTC

Rosetta@home does not allow you to upload your own projects. It is intended more for the projects that BakerLab are already investigating. I believe what you will need to do is to is contact Robetta:
http://www.robetta.org/
which runs the Rosetta program, but not through the Rosetta@home project.

So, three distinct term here:
Rosetta is the computer program
Rosetta@home is the public project using home computers running Rosetta
Robetta uses a cluster of machines in BakerLab to perform specific runs using the Rosetta program.
Rosetta Moderator: Mod.Sense
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Shuxing Zhang

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Message 52524 - Posted: 16 Apr 2008, 16:21:15 UTC - in response to Message 52523.  

Just contacted Dr. Baker.

Thanks a lot.
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Questions and Answers : Getting started : how to use rosetta@home to predict my own RNA structure



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