Message boards : Number crunching : Multiple 5.81 - BOINC_SYMM_FOLD_AND_DOCK_RELAX - crystal_foldanddock errors
Author | Message |
---|---|
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
Task ID 120759419 Name 2o1j__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2o1j_-crystal_foldanddock__2257_52259_0 Workunit 109763138 Task ID 120871488 Name 1rop__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1rop_-crystal_foldanddock__2257_53957_0 Workunit 109865577 Task ID 120906051 Name 1rop__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1rop_-crystal_foldanddock__2257_55234_0 Workunit 109897502 Task ID 120962789 Name 2h3r__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2h3r_-crystal_foldanddock__2257_57266_0 Workunit 109950311 Task ID 120981194 Name 2zta__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2zta_-crystal_foldanddock__2257_57947_0 Workunit 109967342 Task ID 121041704 Name 1utx__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1utx_-crystal_foldanddock__2257_59358_0 Workunit 110022604 Task ID 121081182 Name 2h3r__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2h3r_-crystal_foldanddock__2257_60811_0 Workunit 110058936 Task ID 121099618 Name 2bti__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2bti_-crystal_foldanddock__2257_61490_0 Workunit 110075908 Task ID 121127694 Name 2bti__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2bti_-crystal_foldanddock__2257_62529_0 Workunit 110101883 Task ID 121141134 Name 2bti__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2bti_-crystal_foldanddock__2257_63031_0 Workunit 110114433 Task ID 121159758 Name 2o1j__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2o1j_-crystal_foldanddock__2257_63728_0 Workunit 110131705 Task ID 121193965 Name 2p64__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2p64_-crystal_foldanddock__2257_64247_1 Workunit 110143645 Task ID 121216252 Name 2bti__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2bti_-crystal_foldanddock__2257_66020_0 Workunit 110184416 Task ID 121225139 Name 2or1__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2or1_-crystal_foldanddock__2257_66379_0 Workunit 110192680 Task ID 121278672 Name 1g6u__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1g6u_-crystal_foldanddock__2257_19598_1 Workunit 108010485 Task ID 121280215 Name 1utx__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1utx_-crystal_foldanddock__2257_68568_0 Workunit 110243016 Task ID 121302462 Name 1fe6__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1fe6_-crystal_foldanddock__2257_69456_0 Workunit 110263434 Task ID 121337035 Name 1c26__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1c26_-crystal_foldanddock__2257_64658_0 Workunit 110295265 Task ID 121364463 Name 2o1j__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2o1j_-crystal_foldanddock__2257_71920_0 Workunit 110320121 Task ID 121373245 Name 1igu__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1igu_-crystal_foldanddock__2257_72269_0 Workunit 110328135 Task ID 121402719 Name 2nzc__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2nzc_-crystal_foldanddock__2257_73443_0 Workunit 110355149 Task ID 121435924 Name 2akf__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2akf_-crystal_foldanddock__2257_74784_0 Workunit 110385987 Task ID 121468476 Name 2or1__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2or1_-crystal_foldanddock__2257_76079_0 Workunit 110415780 Task ID 121488464 Name 1rop__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1rop_-crystal_foldanddock__2257_76852_0 Workunit 110433547 Task ID 121546658 Name 2zta__BOINC_SYMM_FOLD_AND_DOCK_RELAX-2zta_-crystal_foldanddock__2257_79158_0 Workunit 110486599 Outcome Client error Client state Compute error Exit status -185 (0xffffff47) core_client_version>5.10.28</core_client_version> <![CDATA[ <message> Can't link input file </message> ]]> |
Path7 Send message Joined: 25 Aug 07 Posts: 128 Credit: 61,751 RAC: 0 |
Hi Greg, Some bad luck... I'm surprised to see your Boinc is still using the Rosetta 5.81. In my Boinc sub folder, all applications I can find are the Rosetta 5.82 & Rosetta_beta 5.85. I'm too much of a newbie to tell which step to take next. Good luck! Path7. |
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
well if you get any of the below tasks you can try them out or abort them. maybe your computer comes up with something different. if you get any of the _1 stuff that i have listed, that defiantly an abort. since two computers tried them and both suffered errors. Hi Greg, |
Tom Philippart Send message Joined: 29 May 06 Posts: 183 Credit: 834,667 RAC: 0 |
According to the Boinc FAQ, the -185 error means: This is an error that will occur when: I would detach, delete the rosetta project folder (normally located here: C:Program FilesBoincprojects) and then attach to the project again. |
dcdc Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,821,902 RAC: 15,180 |
greg, do you have a fixed-size page file? if so, it might be that rosetta is filling it and then crashing... |
Luuklag Send message Joined: 13 Sep 07 Posts: 262 Credit: 4,171 RAC: 0 |
erm maybe you should read some more at the forum. in the porblems with topics it says, all symm fold and dock relax 2257 have been cancelede from the queque du to high error rates.... so just remove them and crunch something else :) |
dcdc Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,821,902 RAC: 15,180 |
it's not just those ones that are VM hogs - i think it's 5.85 that's the problem. |
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
dcdc - no fixed page file size, all settings are default minus swap file space which i gave it part of a large unused partition of my e: drive to use. if it was a virtual memory issue wouldn't it say something like that in the error messages either in the boinc manager log or in the outcome status report? luuklag - i also had some 2318 stuff that went the same way that i missed putting in here in my list. 1uis__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1uis_-crystal_foldanddock__2318_52078_0 -185 (0xffffff47) - can't link input file also for instance something not related to crystalfoldanddock: w007_1_MolecularRep_1_w007_1_ffas03-1-2b0v_StructuralGenomics_a_2325_7744_0 same story you will also see I posted a bunch of other stuff in a seperate 5.82 and 5.85 threads (see my list in the 5.85 thread) as well also with the same 185 error and it was not just crystalfold although that makes up the majority of the compute errors i have. i lost 20 credits in that mess as well as wasted compute time. really annoys me that someone did not check the tasks before they were released. I was on the way to rebuilding my RAC after some other problems when this crashed and burned. any other ideas other than missing info from what the log output says? what exactly does can't link to input file mean? |
Luuklag Send message Joined: 13 Sep 07 Posts: 262 Credit: 4,171 RAC: 0 |
but you do have some right wu's otherwise a deatach deinstall reinstall reattach would seam the solution. |
Greg_BE Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
now that this bad batch has passed through, everything is back to normal. ive been running 1ubi filters with no problem and the crystalfoldanddock with fragment 2257 seem to run ok now. must have been just those particular tasks or part of the file name thing that was going on. life seems to be back to normal now. but you do have some right wu's otherwise a deatach deinstall reinstall reattach would seam the solution. |
Message boards :
Number crunching :
Multiple 5.81 - BOINC_SYMM_FOLD_AND_DOCK_RELAX - crystal_foldanddock errors
©2024 University of Washington
https://www.bakerlab.org