Message boards : Rosetta@home Science : How can I find out what protein my machine is working on?
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LarryM Send message Joined: 9 Apr 06 Posts: 19 Credit: 10,396 RAC: 0 |
Is there a way of finding out some information regarding the protein on which my machine is working? |
eberndl Send message Joined: 17 Sep 05 Posts: 47 Credit: 3,048,122 RAC: 981 |
Absolutely there is. First you have to go to the BOINC manager and get the protein's identifier... I currently have a unit called ALL_TOPOLOGY_CODES_1vcc_434_295_0 The protein's identifier is 1vcc. Then you can go to the Protein Data Bank and enter in the ID (in the search at the top). You'll then get a page (like this) which has the protein's name, what species it's from, what kind of protein it is (mine's a topoisomerase!!) and which paper published the crystal structure (or NMR structure). Hope that helps! Questions? Try the Wiki! Take a look inside my brain |
LarryM Send message Joined: 9 Apr 06 Posts: 19 Credit: 10,396 RAC: 0 |
Absolutely there is. Many thanks indeed for your very rapid response. This is exactly the kind of information I was looking for. Again thanks my friend and good luck! |
eberndl Send message Joined: 17 Sep 05 Posts: 47 Credit: 3,048,122 RAC: 981 |
No problem Larry... Predictor has that site linked up somewhere, so that's how I found it originally. But now I have a question for everyone out there... I now have a unit called 7521_largescale_large_fullatom_relax_dec7521_1_39_1.pdb_437_45_0 How do I find out the protein ID on this sucker?? Any ideas? Questions? Try the Wiki! Take a look inside my brain |
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How can I find out what protein my machine is working on?
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