Page Faults in Rosetta

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Profile dave@damouth.org

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Message 62008 - Posted: 29 Jun 2009, 13:48:38 UTC

Previous threads on page faults don't seem to address this particular issue:

I'm gettng lots of page faults on minirosetta 1.80 work units (deltas of a few thousand, totals of millions). But Task Manager tells me that only about one third of physical memory is in use. Why would there be *any* page faults with unused memory?

This is an i7 920 with 12GB RAM running Windows 7 x64 RC.

These work units are memory hogs - one currently has a peak working set of 353 MB and there are currently 8 of them running on this hyperthreaded quad processor - but that's still only a fraction of the available memory. BOINC preferences are set to use 90% of memory. What don't I understand about paging?
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Message 62010 - Posted: 29 Jun 2009, 16:13:12 UTC

Not sure...

but HyperThreading w/ Rosetta isn't recommended as far as I've read in this forum.
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Message 62012 - Posted: 29 Jun 2009, 17:18:42 UTC

With 12GB of memory, I shouldn't think the HT would be a problem. I believe what you are seeing are "soft" page faults. Quite a lenthy discussion in this thread:
https://boinc.bakerlab.org/rosetta/forum_thread.php?id=2057
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Message 62074 - Posted: 3 Jul 2009, 14:34:56 UTC - in response to Message 62008.  
Last modified: 3 Jul 2009, 14:56:19 UTC

Previous threads on page faults don't seem to address this particular issue:

I'm gettng lots of page faults on minirosetta 1.80 work units (deltas of a few thousand, totals of millions). But Task Manager tells me that only about one third of physical memory is in use. Why would there be *any* page faults with unused memory?

This is an i7 920 with 12GB RAM running Windows 7 x64 RC.

These work units are memory hogs - one currently has a peak working set of 353 MB and there are currently 8 of them running on this hyperthreaded quad processor - but that's still only a fraction of the available memory. BOINC preferences are set to use 90% of memory. What don't I understand about paging?


The developers need to check whether workunits compiled to run under 32-bit versions of Windows can run under x64 using memory beyond the 4 GB that 32-bit addresses can specify directly. If not, all your minirosetta workunits need to fit into the lowest 4 GB of memory, using the rest of the memory only for soft paging, until you get a minirosetta version compiled to run fully in 64-bit mode.
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Message boards : Number crunching : Page Faults in Rosetta



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